Fix vcfstats.c on big-endian platforms#2569
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Use htslib/hts_endian.h functions to avoid problems with unaligned access, and to ensure numbers are byteswapped on platforms that need it. Signed-off-by: John Marshall <jmarshall@hey.com>
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Byteswap as appropriate. As mentioned in PR #2044, this may avoid problems with unaligned access on little-endian platforms too.
After application of this PR, bcftools's tests pass on s390x.
Note that there still exist numerous
#define BRANCH…macros that do not have aconvertparameter. These presumably represent functionality that is not big-endian-correct but which is not exercised by the test suite.