Issues

• Minimum segment length

  marbl/MashMap#75 · Filter by author rmhubley opened on May 6, 2025

• PAF format and identity problem

  marbl/MashMap#73 · Filter by author jianshu93 opened on Jan 26, 2025
  1

• libblis.so.4 not found via bioconda installation

  marbl/MashMap#72 · Filter by author mxwang66 opened on Nov 24, 2024
  3

• Inconsistent alignments depending on whether reference file is gzipped or not

  marbl/MashMap#70 · Filter by author arpfennig opened on Oct 7, 2024
  7

• Where is the “dependency-free linux and OSX binaries”

  marbl/MashMap#68 · Filter by author kuangzhuoran opened on May 27, 2024

• Can't find precompiled binaries

  marbl/MashMap#67 · Filter by author JWDebler opened on Feb 12, 2024

• Is MKL dependency missing on conda?

  marbl/MashMap#59 · Filter by author skoren opened on Jul 10, 2023
  2

• Problem with linux binary distribution for mashmap 3

  marbl/MashMap#52 · Filter by author Dmitry-Antipov opened on Jun 1, 2023

• segmentation fault with mashmap compare when empty file is passed to -r parameter

  marbl/MashMap#33 · Filter by author taylorreiter opened on Jun 2, 2021

• mashmap does not give results if input sequences are too short

  marbl/MashMap#31 · Filter by author b-brankovics opened on Oct 1, 2020
  1

• Ordering output with reference sequences

  marbl/MashMap#30 · Filter by author aaronphillips7493 opened on Jul 17, 2020
  3

• Scaffolding

  marbl/MashMap#26 · Filter by author francicco opened on Feb 11, 2020
  3

• All-against-all mappings

  marbl/MashMap#24 · Filter by author iminkin opened on Nov 26, 2019
  1

• Segmentation fault (core dumped)

  marbl/MashMap#21 · Filter by author jaclyn-taroni opened on Jun 5, 2019
  10

• Save sketches for reuse

  marbl/MashMap#20 · Filter by author snayfach opened on Apr 25, 2019
  1

• Window and K-mer size

  marbl/MashMap#19 · Filter by author HTaekOppa opened on Apr 23, 2019
  1

• generateDotPlot for publication: png sizes and axis labels

  marbl/MashMap#16 · Filter by author rando2 opened on Mar 22, 2019
  2

• Interpretation of gnuplot

  marbl/MashMap#15 · Filter by author HTaekOppa opened on Jan 24, 2019
  6

• Questions about the alignment of MashMap

  marbl/MashMap#12 · Filter by author YiweiNiu opened on Jul 13, 2018
  6

• repo request: adding small example files to quickly check installation

  marbl/MashMap#11 · Filter by author evanbiederstedt opened on May 20, 2018
  

• MashMap 2.0 Compiling error: undefined reference to '__wrap_memcpy'

  marbl/MashMap#10 · Filter by author uoabowen opened on May 8, 2018
  3

• About mashmap out

  marbl/MashMap#9 · Filter by author jhtrujillo opened on Apr 13, 2018
  5

• perl script generateDotPlot fails

  marbl/MashMap#8 · Filter by author ebioman opened on Mar 21, 2018
  2